All Cancers

Current Projects
Lexy von Diezmann, PhD

Dr. von Diezmann is a biophysicist who studies how cells regulate the pathway used to repair broken DNA. Errors in specific DNA repair pathways are an early step in the development of many cancers, such as with defects in homologous recombination for breast, ovarian, and pancreatic cancers. The Diezmann lab uses high-resolution microscopy techniques to visualize the process by which DNA breaks are designated for specific repair fates, working primarily in live meiotic nuclei of the model organism C. elegans. By elucidating the mechanisms by which protein assemblies form and transmit information along chromosomes and throughout the nucleus, her lab will help provide a foundation for the development of novel chemotherapies based on modulating the DNA damage response.

Project title: "Single-molecule dynamics of DNA repair assemblies in live cells"
Institution: University of Minnesota
Award Program: Dale Frey Scientist
Cancer Type: Pancreatic, All Cancers
Research Area: Chromosome and Telomere Biology
McLane Watson, PhD

Cancer immunotherapy has revolutionized the way we treat cancer; however, it is only successful in a small subset of patients. Optimally functioning CD8 T cells, the specialized killers of the immune system, are key to the success of cancer immunotherapies. While CD8 T cell function is highly influenced by their metabolism, little is understood about how metabolism changes the function of these cells. Dr. Watson hypothesizes that metabolism affects CD8 T cell function by altering how tightly its DNA is packaged (its epigenetics), leading to altered gene expression. Using a mouse model of adoptive T cell therapy, a widely used immunotherapy in humans, and epigenetic techniques, Dr. Watson proposes to uncover how metabolism influences CD8 T cell epigenetic landscapes to control their function. He plans to apply these findings to improve T cell function and enhance tumor clearance. Dr. Watson received his PhD from the University of Pittsburgh, Pittsburgh and his BS from Hope College, Holland, Michigan.

 

Project title: "Understanding CD8 T cell epigenetic changes fueled by S-adenosylmethionine metabolism for improved adoptive cell therapy"
Institution: Van Andel Institute
Award Program: Fellow
Sponsor(s) / Mentor(s): Russell G. Jones, PhD
Cancer Type: Skin, All Cancers
Research Area: Basic Immunology
Nina Weichert-Leahey, MD

Neuroblastoma is a rare pediatric cancer that typically arises in the adrenal glands, located above the kidney. Children with high-risk neuroblastoma often have poor prognoses despite intense treatment-including maintenance treatment with retinoic acid-underscoring the need for new treatments to improve long-term outcomes. Retinoic acid, which is orally available and generally well tolerated, helps neuroblastoma cells mature (differentiate) into normal cells; however, this process is entirely reversible once the retinoic acid is withdrawn. If this differentiating effect could be made permanent with the addition of a second drug, a combination treatment with retinoic acid could become a novel method of preventing patient relapse. After testing a panel of 452 small molecule drugs, Dr. Weichert-Leahey discovered that a drug called PF-9363 accentuated the effects of retinoic acid in neuroblastoma the most. She will now study how PF-9363 functions, alone and together with retinoic acid, both in cells and patient-derived neuroblastoma models in mice. These experiments will indicate whether combinations of this new compound with retinoic acid may improve outcomes for children with high-risk neuroblastoma.

Project title: "Elucidating the role of KAT6A and KAT6B in the epigenetic reprogramming of neuroblastoma to enforce neuronal differentiation"
Institution: Dana-Farber Cancer Institute
Award Program: Physician-Scientist
Sponsor(s) / Mentor(s): A. Thomas Look, MD
Cancer Type: All Cancers
Research Area: Epigenetics
Patrick Woida, PhD

Dr. Woida studies the foodborne pathogens Listeria monocytogenes and Shigella flexneri that enter and replicate within human cells. These bacteria also directly infect neighboring cells by pushing against the host cell membrane to form long membrane protrusions that extend and eventually release the bacteria into the new cell. This process of cell-to-cell spread requires the bacteria to hijack intercellular signaling pathways to reshape the host cell membrane. These signaling pathways normally regulate human cell adhesion and motility, and their dysregulation promotes tumor growth and metastasis. Dr. Woida’s goal is to uncover the unique mechanisms by which these pathogens remodel the host cell membrane to gain insight into how the co-opted intercellular signaling pathways function under both healthy conditions and tumor progression. Dr. Woida received his PhD from Northwestern University and his BS from the University of Illinois at Urbana-Champaign.

Project title: "Functional dissection of the bacterial-host interface during cell-to-cell spread"
Institution: Massachusetts Institute of Technology
Award Program: Fellow
Sponsor(s) / Mentor(s): Rebecca Lamason, PhD
Cancer Type: All Cancers
Research Area: Microbiology
Wen Mai Wong, PhD

Multiple cancers, including prostate, breast, and gastrointestinal cancers, are known to be heavily innervated. However, the role of neurons and their signaling within the tumor microenvironment remains unknown. Previous work has shown that transecting the vagus nerve can block the progression of gastric cancer, emphasizing a critical role for the vagal neurons in this disease. However, these transections produce side effects, making it a difficult strategy to translate to the clinic. Dr. Wong [Kenneth G. and Elaine A. Langone Fellow] is proposing a new method to non-invasively silence neurons within the body. Specifically, she will use ultrasound to silence specific neurons in rodent models in order to determine the impact of these neurons on animal behavior and disease physiology, including the tumor microenvironment. Dr. Wong received her PhD from the University of Texas Southwestern Medical Center and her BS from St. Mary’s University.

Project title: "Modulation of neuronal circuitry using sonogenetics"
Institution: The Salk Institute for Biological Studies
Named Award: Kenneth G. and Elaine A. Langone Fellow
Award Program: Fellow
Sponsor(s) / Mentor(s): Sreekanth H. Chalasani, PhD
Cancer Type: All Cancers
Research Area: Neuroscience
Xianfeng Zeng, PhD

Emerging evidence underscores the profound impact of the gut microbiome, a collection of microorganisms within our digestive system, on cancer. These microorganisms collectively generate various metabolites that can significantly influence cancer progression and treatment outcomes. Dr. Zeng is employing synthetic communities and mouse cancer models to delve into the intricate connections between cancer and the microbiome. His synthetic communities, comprised of over 100 strains, allow for precise manipulation of the microbiome to elucidate the role of specific microbial metabolites in cancer. Additionally, Dr. Zeng is studying community-scale metabolism and using genetically edited strains to design synthetic communities with desired metabolic profiles. These approaches will gain valuable insights into microbiome-cancer interactions and establish a broadly applicable strategy to harness the therapeutic potential of gut microbiome. Dr. Zeng received his PhD from Princeton University, Princeton and his BS from Tsinghua University, Beijing.

Project title: "Microbiome-Cancer Connection: From Understanding to Rational Design with Defined Communities"
Institution: Stanford University
Award Program: Fellow
Sponsor(s) / Mentor(s): Michael A. Fischbach, PhD
Cancer Type: Colorectal, All Cancers
Research Area: Metabolism
Juner Zhang, PhD

In cells, DNA wraps around a protein complex consisting of proteins called histones. Chemical modifications to histones can affect gene expression, which is key to activating or suppressing cancer progression. Histone monoaminylation, in which an amine (e.g., serotonin, dopamine, or histamine) attaches itself to a histone, is a newfound type of epigenetic modification whose role remains elusive in these processes. Dr. Zhang is using chemical biology tools to study the functions of these modifications as well as their effects on other adjacent, pre-existing cancer-associated modifications. This research may establish a foundation for how this epigenetic modification regulates gene expression and offer insight into the role of amines in the progression of cancer and human neurodegenerative disorders. Dr. Zhang received his PhD from the California Institute of Technology, Pasadena and his BS from Tsinghua University, Beijing.

Project title: "The role of histone H2A.Z monoaminylation in transcription regulation"
Institution: Princeton University
Award Program: Fellow
Sponsor(s) / Mentor(s): Tom W. Muir, PhD
Cancer Type: All Cancers
Research Area: Chemical Biology
Yunxiao Zhang, PhD

Dr. Zhang [Merck Fellow] aims to address what information is sensed and relayed by sensory nerve fibers within the pancreas. Internal organs receive sensory nerve fibers that constantly monitor their conditions but the exact mechanism for this type of sensation is understudied. As an organ that is instrumental to blood glucose regulation and food digestion, the pancreas receives a host of different sensory nerve fibers, but the information conveyed by these fibers and their function are still yet to be precisely defined. Interaction between sensory nerve fibers and the pancreas enables rapid detection of changes in metabolic states and may constitute an important feedback mechanism complementary to the well-defined humoral regulation. Local sensory fibers are also involved in cancer progression and decoding of the sensory information would facilitate early diagnosis of pancreatic cancer.

Project title: "Sensory innervation of the pancreas"
Institution: The Scripps Research Institute
Named Award: Merck Fellow
Award Program: Fellow
Sponsor(s) / Mentor(s): Ardem Patapoutian, PhD
Cancer Type: All Cancers
Research Area: Animal Models/Mouse Models
Ziyang Zhang, PhD

Cancer growth is often driven by the dysregulation of a class of proteins known as small GTPases. These proteins act as molecular "on/off" switches that regulate critical cellular processes such as cell division and movement. However, in cancer, these molecular switches often become stuck in the "on" state due to mutations that hamper GTP hydrolysis, the reaction that turns "off" the GTPase switch. One notable example is the family of GTPases encoded by Ras genes, which are mutated in 30% of all human cancers. Dr. Zhang's research aims to design small molecules that inactivate these mutant GTPases by accelerating GTP hydrolysis. His research will provide a new therapeutic mechanism for the treatment of mutant Ras-driven cancer for which no direct therapies are yet available. The design principles may also apply to the modulation of other small GTPases whose overactivation underlies cancer progression.

Project title: "Small molecule activators of GTP hydrolysis for mutant Ras-driven cancer"
Institution: University of California, Berkeley
Award Program: Innovator
Cancer Type: All Cancers
Research Area: Chemical Biology
Xiaoyu Zhang, PhD

Dr. Zhang is developing small molecules that promote targeted protein degradation in human cancers. Conventional small molecule anticancer drugs act by directly inhibiting the functions of proteins. Although targeted cancer therapies have been successful in recent years, many oncogenic proteins are still considered “undruggable” because the conventional drug design strategy fails to interfere with these proteins. One way to target “undruggable” oncogenic proteins may be to create a new type of small molecule that delivers these proteins to the cellular degradation system, thereby promoting their destruction. By integrating chemical tools, proteomic platforms, and molecular biology approaches, Dr. Zhang aims to develop protein degraders as a new drug modality to expand treatment opportunities in human cancer.

Project title: “Discovery of chemical probes that support targeted protein degradation in human cancer”
Institution: Northwestern University
Award Program: Dale Frey Scientist
Cancer Type: All Cancers
Research Area: Chemical Biology
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